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SRX23751224: GSM8111227: Histone ChIP-seq from BLaER1 (ENCLB580FXE); Homo sapiens; ChIP-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 67.5M spots, 3.4G bases, 2.2Gb downloads

Submitted by: NCBI (GEO)
Study: GSE59395: Genome-wide map of regulatory interactions in the human genome
PRJNA63443 • SRP012412 • All experiments • All runs
show Abstracthide Abstract
Summary: We generated a genome-wide interaction map of regulatory elements in human cells (K562, GM12878) using Chromatin Interaction Analysis by Paired-End Tag sequencing (ChIA-PET) experiments targeting six broadly distributed factors. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Overall Design: Chromatin interactions identified by ChIA-PET for 4 different histone modifications, RAD21 and RNAPII in K562 cell line, two biological replicates each.
Sample: ENCODE biosample ENCBS017NGB
SAMN40088233 • SRS20571503 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 2000
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol: general protocol: https://www.encodeproject.org/documents/74685878-ae42-4070-955a-b3faabf64d44/@@download/attachment/growth_and_transdifferentiation.pdf, general protocol: https://www.encodeproject.org/documents/a60eb23e-58cd-4b29-a925-cf0c3d7d2e42/@@download/attachment/chromatin_immunoprecipitation.pdf, pipeline protocol: https://www.encodeproject.org/documents/cbec7655-48a2-4166-af75-d71b44e00f46/@@download/attachment/ChIP-seq_data_processing.pdf
Experiment attributes:
GEO Accession: GSM8111227
Links:
Runs: 1 run, 67.5M spots, 3.4G bases, 2.2Gb
Run# of Spots# of BasesSizePublished
SRR2810614267,460,6433.4G2.2Gb2024-03-07

ID:
32041308

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